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Selected Publication:
SHR Neuro Cancer Cardio Lipid Metab Microb
Helmberg, W; Dunivin, R; Feolo, M.
The sequencing-based typing tool of dbMHC: typing highly polymorphic gene sequences.
Nucleic Acids Res. 2004; 32(Web ): W173-W175.
Doi: 10.1093/nar/gkh424
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- Leading authors Med Uni Graz
- Helmberg Wolfgang
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- Abstract:
- The dbMHC resource (http://www.ncbi.nlm.nih.gov/mhc/sbt.cgi?cmd=main) at the National Center for Biotechnology Information (NCBI) has developed an online tool for evaluating the allelic composition of sequencing-based typing (SBT) results of cDNA or genomic sequences. Whether the samples are heterozygous, haploid or a combination of the two, they can be compared with two up-to-date databases of all known alleles of several human leukocyte antigen (HLA) and killer cell immunoglobulin-like receptor (KIR) loci. The results of the submission are returned as a table of potential allele hits, along with the respective base changes and an interactive sequence viewer for close examination of the alignment.
- Find related publications in this database (using NLM MeSH Indexing)
- Algorithms -
- Alleles -
- DNA Fingerprinting -
- Databases, Nucleic Acid -
- HLA Antigens - genetics
- Internet - genetics
- Polymorphism, Genetic - genetics
- Receptors, Immunologic - genetics
- Sequence Alignment - genetics
- Sequence Analysis, DNA - genetics
- Software - genetics