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Leitner, E; Kessler, HH.
Broad-range PCR for the identification of bacterial and fungal pathogens from blood: a sequencing approach.
Methods Mol Biol. 2015; 1237(1):129-138 Doi: 10.1007/978-1-4939-1776-1_13
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Leading authors Med Uni Graz
Leitner-Meyer Eva
Co-authors Med Uni Graz
Kessler Harald
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Abstract:
Broad-range PCR has become a valuable tool for the identification of microorganisms in the clinical laboratory over the last years. It was primarily used to identify slow-growing and fastidious microorganisms with poor biochemical activity. Nowadays, it is also used to identify microorganisms directly from clinical samples such as blood or punctuates from primarily sterile body sites. In these specimens, the usage of broad-range PCR is challenging regarding contamination and standardization. To overcome these problems, a new test system, the SepsiTest™, was introduced recently employing broad-range PCR for the identification of microorganisms in septic patients. In this chapter, the test system is described and the equipment necessary listed.
Find related publications in this database (using NLM MeSH Indexing)
Automation, Laboratory -
Bacteremia - diagnosis
Bacteremia - microbiology
Bacteremia - pathology
Bacteria - genetics
Bacteria - growth & development
Bacteria - isolation & purification
Blood Specimen Collection -
Culture Media - chemistry
DNA, Bacterial - genetics
DNA, Bacterial - isolation & purification
DNA, Fungal - genetics
DNA, Fungal - isolation & purification
Fungemia - diagnosis
Fungemia - microbiology
Fungemia - pathology
Fungi - genetics
Fungi - growth & development
Fungi - isolation & purification
High-Throughput Nucleotide Sequencing -
Humans -
Molecular Diagnostic Techniques - instrumentation
Molecular Diagnostic Techniques - methods
Polymerase Chain Reaction - instrumentation
Polymerase Chain Reaction - methods
Sequence Analysis, DNA -

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