Medizinische Universität Graz - Research portal
Selected Publication:
SHR Neuro Cancer Cardio Lipid Metab Microb
Halwachs, B; Höftberger, J; Stocker, G; Snajder, R; Gorkiewicz, G; Thallinger, GG.
High-Troughput Characterization and Comparison of Microbial Communities.
Biomed Tech (Berl). 2013; 58 Suppl 1(1):
Doi: 10.1515/bmt-2013-4312
Web of Science
PubMed
FullText
FullText_MUG
- Leading authors Med Uni Graz
- Halwachs-Wenzl Bettina
- Study Group Members Med Uni Graz:
- Gorkiewicz Gregor
- Altmetrics:
- Dimensions Citations:
- Plum Analytics:
- Scite (citation analytics):
- Abstract:
- The analysis of the huge amount of generated sequence data as well as pyrosequencing noise and chimeric sequences originating from PCR amplification pose a considerable challenge to the individual researcher in doing microbiome studies. The unbiased knowledge about microbial community composition and -structure as well as the interactions with the human host microbiome can give important insights into its role in human health and disease. Here we introduce SnoWMAn, the high-throughput microbiome analysis pipeline and additionally investigate the effects of sequencing noise on non denoised and data denoised using two different approaches.
- Find related publications in this database (Keywords)
- Next Generation Sequencing
- Community Composition Analysis
- Denoising
- OTU inflation