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SFB: Mathematical Optimization with Applications in Biomedical Sciences

Project Leader:

Plank Gernot

Duration:

01.05.2011-31.12.2014

Programme:

Spezialforschungsbereiche (SFB)

Type of Research

basic research

Staff

Plank, G, Project Leader

MUG Research Units

Division of Medical Physics and Biophysics

Funded by

FWF, Fonds zur Förderung der Wissenschaftlichen Forschung, Georg-Coch-Platz 2, 1010 Wien, Austria

FWF-Grant-DOI: 10.55776/F32

Project results published

> Electro-biomechanical Modeling... CARS 2018 Computer Assisted Radiology and Surgery; JUN 20-23, 2018; Berlin, GERMANY. 2018.

> A work flow to build and validate patient specific... Med Image Anal. 2018; 47:153-163

> Universal ventricular coordinates: A generic frame... Med Image Anal. 2018; 45:83-93

> Personalizing models of total heart function... Multi-scale hard and soft tissue modelling workshop; JUN 18-20, 2018; Sheffield. 2018.

> Stochastic spontaneous calcium release events and ... Chaos. 2017; 27(9):093910-093910

> PDE constrained optimization of electrical defibri... Int J Numer Method Biomed Eng. 2016; 32(4):e02742-e02742

> Computing a Heartbeat - A simulation based Approac... Emerging Mathematical Topics in Biology and Life Sciences; MAY 7, 2015; Graz. 2015.

> Biophotonic Modelling of Cardiac Optical Imaging.... Adv Exp Med Biol. 2015; 859(11 Pt A):367-404

> Application of optimal control to the cardiac defi... APPL NUMER MATH. 2015; 95: 130-139.

> Beneficial Effect on Cardiac Resynchronization Fro... Circ Arrhythm Electrophysiol. 2015; 8(5):1164-1172

> Strongly Scalable Numerical Approaches for Modelin... SIAM Conference on Computational Science and Engineering; Mar 14-18, 2015; Salt Lake City, Utah. 2015.

> Stochastic spontaneous calcium release events trig... Cardiovasc Res. 2015; 107(1):175-183

> Computing a Heart Beat A Simulation-based Approac... Colloquium of the SFB 910 - Control of self-organizing nonlinear systems: Theoretical methods and concepts of application; FEB 13, 2015; Berlin. 2015.

> Simulating photon scattering effects in structural... Front Physiol. 2014; 5(2):338-338

> Sensitivity and specificity of substrate mapping: ... J Cardiovasc Electrophysiol. 2014; 25(7):774-780

> Influence of the Purkinje-muscle junction on trans... Cardiovasc Res. 2014; 103(4):629-640

> Mechanism of reentry induction by a 9-V battery in... Am J Physiol Heart Circ Physiol. 2014; 306(7):H1041-H1053

> Structural heterogeneity modulates effective refra... PLoS One. 2014; 9(10):e109754-e109754

> Tachycardia in post-infarction hearts: insights fr... PLoS One. 2013; 8(7):e68872-e68872

> The Functional Role of Electrophysiological Hetero... Am J Physiol Heart Circ Physiol. 2013; 304(9):H1240-H1252

> Optimal control approach to termination of re-entr... J Math Biol. 2013; 67(2):359-388

> Electroanatomical characterization of atrial micro... IEEE Trans Biomed Eng. 2013; 60(8):2339-2349

> Influence of ischemic core muscle fibers on surfac... Med Biol Eng Comput. 2012; 50(5):461-472

> Multiscale Computational Models of Integrated Card... Symposium on Cardiovascular Dynamics, Berlin Center for Studies of Complex Chemical Systems ; FEB 9, 2012; Berlin, GERMANY. 2012.

> Accelerating Cardiac Bidomain Simulations Using Gr... IEEE Trans Biomed Eng. 2012; 59(8):2281-2290

> Analyses of the Redistribution of Work following C... PLoS One. 2012; 7(8):e43504-e43504

> Methodology for patient-specific modeling of atria... J Electrocardiol. 2012; 45(6):640-645

> Investigating the role of the coronary vasculature... Circ Arrhythm Electrophysiol. 2012; 5(1): 210-219.

> The role of fine-scale anatomical structure in the... J Physiol. 2012; 590(Pt 18):4515-4535

> Biophysical modeling to simulate the response to m... Pacing Clin Electrophysiol. 2012; 35(2): 204-214.

> Application of Advanced Bidomain Solver Techniques... Book of Abstracts of the 8-th European Solid Mechanics Conference. 2012; -8-th European Solid Mechanics Conference; July 9-13, 2012; Graz, Austria.

> A novel rule-based algorithm for assigning myocard... Ann Biomed Eng. 2012; 40(10):2243-2254

> Three-Dimensional Mechanisms of Increased Vulnerab... J Physiol. 2012; 590(Pt 18):4537-4551

> Cardiac bidomain bath-loading effects during arrhy... Biophys J. 2011; 101(12):2871-2881

> Verification of cardiac tissue electrophysiology s... Philos Transact A Math Phys Eng Sci. 2011; 369(1954): 4331-4351.

> Bidomain ECG simulations using an augmented monodo... IEEE Trans Biomed Eng. 2011; 58(8):

> A macro finite-element formulation for cardiac ele... IEEE Trans Biomed Eng. 2011; 58(4): 1055-1065.

> Estimation of local orientations in fibrous struct... IEEE Trans Biomed Eng. 2011; 58(6): 1762-1772.

> Accelerating cardiac excitation spread simulations... CONCURR COMPUT-PRACT EXP. 2011; 23(7): 708-720.

> Representing cardiac bidomain bath-loading effects... IEEE Trans Biomed Eng. 2011; 58(4): 1066-1075.

> Numerical solution for optimal control of the reac... COMPUT OPTIM APPL. 2011; 49(1): 149-178.

> The role of photon scattering in voltage-calcium f... Biophys J. 2011; 101(2): 307-318.

> Inter-model consistency and complementarity: Learn... Prog Biophys Mol Biol. 2011; 107(1):122-133

> A finite element approach for modeling micro-struc... Conf Proc IEEE Eng Med Biol Soc. 2011; 2011(5):437-440

> Image-based models of cardiac structure in health ... Wiley Interdiscip Rev Syst Biol Med. 2010; 2(4): 489-506.

> Modeling the role of the coronary vasculature duri... IEEE Trans Biomed Eng. 2010; 57(10): 2335-2345.

> Purkinje-mediated Effects in the Response of Quies... Ann Biomed Eng. 2010; 38(2): 456-468.

> Automatically generated, anatomically accurate mes... IEEE Trans Biomed Eng. 2009; 56(5): 1318-1330.

> Low energy defibrillation in human cardiac tissue:... Biophys J. 2009; 96(4): 1364-1373.

> Towards predictive modelling of the electrophysiol... Exp Physiol. 2009; 94(5): 563-577.

> Arrhythmogenic mechanisms of the Purkinje system d... Heart Rhythm. 2009; 6(12): 1782-1789.