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Minarro-Gimenez Jose Antonio |

** = Publications listed in SCI/SSCI/Pubmed

2019

Full paper/article (Journal)

** Miñarro-Giménez, JA; Cornet, R; Jaulent, MC; Dewenter, H; Thun, S; Gøeg, KR; Karlsson, D; Schulz, S Quantitative analysis of manual annotation of clinical text samples.
Int J Med Inform. 2019; 123:37-48 Doi: 10.1016/j.ijmedinf.2018.12.011 [OPEN ACCESS]
Web of Science PubMed FullText FullText_MUG

 

2018

Full paper/article (Journal)

** Miñarro-Giménez, JA; Martínez-Costa, C; Karlsson, D; Schulz, S; Gøeg, KR Qualitative analysis of manual annotations of clinical text with SNOMED CT.
PLoS One. 2018; 13(12):e0209547-e0209547 Doi: 10.1371/journal.pone.0209547 [OPEN ACCESS]
Web of Science PubMed PUBMED Central FullText FullText_MUG

 

** Miñarro-Giménez, JA; Schulz, S Analysis of MeSH Indexing Patterns and Frequency of Predicates.
Stud Health Technol Inform. 2018; 247:666-670
PubMed

 

2017

Full paper/article (Journal)

** Miñarro-Giménez, JA; Martínez-Costa, C; López-García, P; Schulz, S Building SNOMED CT Post-Coordinated Expressions from Annotation Groups.
Stud Health Technol Inform. 2017; 235(12):446-450
PubMed

 

2016

Full paper/article (Journal)

** Carmen Legaz-García, MD; Miñarro-Giménez, JA; Menárguez-Tortosa, M; Fernández-Breis, JT Generation of open biomedical datasets through ontology-driven transformation and integration processes.
J Biomed Semantics. 2016; 7(12):32-32 Doi: 10.1186/s13326-016-0075-z [OPEN ACCESS]
Web of Science PubMed PUBMED Central FullText FullText_MUG

 

** Kreuzthaler, M; Miñarro-Giménez, JA; Schulz, S MapReduce in the Cloud: A Use Case Study for Efficient Co-Occurrence Processing of MEDLINE Annotations with MeSH.
Stud Health Technol Inform. 2016; 228(12):582-586
PubMed

 

** Miñarro-Giménez, JA; Martínez, MQ; Fernández-Breis, JT; Schulz, S Publishing Biomedical Predication Repository About MeSH Co-Occurrences in MEDLINE.
Stud Health Technol Inform. 2016; 228(12):765-769
PubMed

 

2015

Full paper/article (Journal)

** Legaz-García, Mdel C; Miñarro-Giménez, JA; Menárguez-Tortosa, M; Fernández-Breis, JT Lessons learned in the generation of biomedical research datasets using Semantic Open Data technologies.
Stud Health Technol Inform. 2015; 210(12):165-169
PubMed

 

** Miñarro-Giménez, JA; Hellrich, J; Schulz, S Acquisition of Character Translation Rules for Supporting SNOMED CT Localizations.
Stud Health Technol Inform. 2015; 210(12):597-601
PubMed

 

** Miñarro-Giménez, JA; Kreuzthaler, M; Bernhardt-Melischnig, J; Martínez-Costa, C; Schulz, S Acquiring Plausible Predications from MEDLINE by Clustering MeSH Annotations.
Stud Health Technol Inform. 2015; 216(12):716-720
PubMed

 

** Miñarro-Giménez, JA; Kreuzthaler, M; Schulz, S Knowledge Extraction from MEDLINE by Combining Clustering with Natural Language Processing.
AMIA Annu Symp Proc. 2015; 2015(12): 915-924. [OPEN ACCESS]
PubMed PUBMED Central

 

** Samwald, M; Miñarro Giménez, JA; Boyce, RD; Freimuth, RR; Adlassnig, KP; Dumontier, M Pharmacogenomic knowledge representation, reasoning and genome-based clinical decision support based on OWL 2 DL ontologies.
BMC Med Inform Decis Mak. 2015; 15(12):12-12 Doi: 10.1186/s12911-015-0130-1 [OPEN ACCESS]
Web of Science PubMed PUBMED Central FullText FullText_MUG

 

2014

Full paper/article (Journal)

** Legaz-García, Mdel C; Martínez-Costa, C; Miñarro-Giménez, JA; Fernández-Breis, JT; Schulz, S; Menárguez-Tortosa, M Ontology patterns-based transformation of clinical information.
Stud Health Technol Inform. 2014; 205(12):1018-1022
PubMed

 

** Miñarro-Giménez, JA; Blagec, K; Boyce, RD; Adlassnig, KP; Samwald, M An ontology-based, mobile-optimized system for pharmacogenomic decision support at the point-of-care.
PLoS One. 2014; 9(5):e93769-e93769 Doi: 10.1371/journal.pone.0093769 [OPEN ACCESS]
Web of Science PubMed PUBMED Central FullText FullText_MUG

 

** Minarro-Giménez, JA; Marín-Alonso, O; Samwald, M Exploring the application of deep learning techniques on medical text corpora.
Stud Health Technol Inform. 2014; 205(12): 584-588.
PubMed

 

** Samwald, M; Minarro-Giménez, JA; Blagec, K; Adlassnig, KP Towards a global IT system for personalized medicine: the Medicine Safety Code initiative.
Stud Health Technol Inform. 2014; 205(12): 261-265.
PubMed

 

** Samwald, M; Minarro-Giménez, JA; Blagec, K; Adlassnig, KP Towards a global IT system for personalized medicine: the Medicine Safety Code initiative.
Stud Health Technol Inform. 2014; 198(12): 25-31.
PubMed

 

2012

Full paper/article (Journal)

** Legaz-García, Mdel C; Miñarro-Giménez, JA; Madrid, M; Menárguez-Tortosa, M; Torres Martínez, S; Fernández-Breis, JT Linking genome annotation projects with genetic disorders using ontologies.
J Med Syst. 2012; 36 Suppl 1(5):S11-S23 Doi: 10.1007/s10916-012-9890-7
Web of Science PubMed FullText FullText_MUG

 

** Maldonado, JA; Costa, CM; Moner, D; Menárguez-Tortosa, M; Boscá, D; Miñarro Giménez, JA; Fernández-Breis, JT; Robles, M Using the ResearchEHR platform to facilitate the practical application of the EHR standards.
J Biomed Inform. 2012; 45(4):746-762 Doi: 10.1016/j.jbi.2011.11.004 [OPEN ACCESS]
Web of Science PubMed FullText FullText_MUG

 

2011

Full paper/article (Journal)

** Miñarro-Gimenez, JA; Egaña Aranguren, M; Martínez Béjar, R; Fernández-Breis, JT; Madrid, M Semantic integration of information about orthologs and diseases: the OGO system.
J Biomed Inform. 2011; 44(6):1020-1031 Doi: 10.1016/j.jbi.2011.08.002 [OPEN ACCESS]
Web of Science PubMed FullText FullText_MUG

 

2009

Full paper/article (Journal)

** Miñarro-Gimenez, JA; Madrid, M; Fernandez-Breis, JT OGO: an ontological approach for integrating knowledge about orthology.
BMC Bioinformatics. 2009; 10 Suppl 10: S13-S13. Doi: 10.1186/1471-2105-10-S10-S13 [OPEN ACCESS]
Web of Science PubMed PUBMED Central FullText FullText_MUG

 

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