** = Publications listed in SCI/SSCI/Pubmed
** Weigl, S; Dabernig-Heinz, J; Granitz, F; Lipp, M; Ostermann, L; Harmsen, D; Trinh, TT; Steinmetz, I; Wagner, GE; Lichtenegger, S
Improving Nanopore sequencing-based core genome MLST for global infection control: a strategy for GC-rich pathogens like Burkholderia pseudomallei.
J Clin Microbiol. 2025; e0156924
Doi: 10.1128/jcm.01569-24
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** Dabernig-Heinz, J; Wagner, GE; Prior, K; Lipp, M; Kienesberger, S; Ruppitsch, W; Rønning, TG; Harmsen, D; Steinmetz, I; Leitner, E
Core genome multilocus sequence typing (cgMLST) applicable to the monophyletic Klebsiella oxytoca species complex.
J Clin Microbiol. 2024; 62(6):e0172523
Doi: 10.1128/jcm.01725-23
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** Wagner, GE; Berner, A; Lipp, M; Kohler, C; Assig, K; Lichtenegger, S; Saqib, M; Müller, E; Trinh, TT; Gad, AM; Söffing, HH; Ehricht, R; Laroucau, K; Steinmetz, I
Protein Microarray-Guided Development of a Highly Sensitive and Specific Dipstick Assay for Glanders Serodiagnostics.
J Clin Microbiol. 2023; 61(1):e0123422
Doi: 10.1128/jcm.01234-22
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** Wagner, GE; Dabernig-Heinz, J; Lipp, M; Cabal, A; Simantzik, J; Kohl, M; Scheiber, M; Lichtenegger, S; Ehricht, R; Leitner, E; Ruppitsch, W; Steinmetz, I
Real-Time Nanopore Q20+ Sequencing Enables Extremely Fast and Accurate Core Genome MLST Typing and Democratizes Access to High-Resolution Bacterial Pathogen Surveillance.
J Clin Microbiol. 2023; 61(4):e0163122
Doi: 10.1128/jcm.01631-22
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** Wagner, GE; Stanjek, TFP; Albrecht, D; Lipp, M; Dunachie, SJ; Föderl-Höbenreich, E; Riedel, K; Kohler, A; Steinmetz, I; Kohler, C
Deciphering the human antibody response against Burkholderia pseudomallei during melioidosis using a comprehensive immunoproteome approach.
Front Immunol. 2023; 14: 1294113
Doi: 10.3389/fimmu.2023.1294113
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** Lichtenegger, S; Trinh, TT; Assig, K; Prior, K; Harmsen, D; Pesl, J; Zauner, A; Lipp, M; Que, TA; Mutsam, B; Kleinhappl, B; Steinmetz, I; Wagner, GE
Development and Validation of a Burkholderia pseudomallei Core Genome Multilocus Sequence Typing Scheme To Facilitate Molecular Surveillance.
J Clin Microbiol. 2021; 59(8): e0009321
Doi: 10.1128/JCM.00093-21
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** Wagner, GE; Totaro, MG; Volland, A; Lipp, M; Saiger, S; Lichtenegger, S; Forstner, P; von, Laer, D; Oberdorfer, G; Steinmetz, I
A Novel High-Throughput Nanopore-Sequencing-Based Strategy for Rapid and Automated S-Protein Typing of SARS-CoV-2 Variants.
Viruses. 2021; 13(12):
Doi: 10.3390/v13122548
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** Wagner, GE; Föderl-Höbenreich, E; Assig, K; Lipp, M; Berner, A; Kohler, C; Lichtenegger, S; Stiehler, J; Karoonboonyanan, W; Thanapattarapairoj, N; Promkong, C; Koosakulnirand, S; Chaichana, P; Ehricht, R; Gad, AM; Söffing, HH; Dunachie, SJ; Chantratita, N; Steinmetz, I
Melioidosis DS rapid test: A standardized serological dipstick assay with increased sensitivity and reliability due to multiplex detection.
PLoS Negl Trop Dis. 2020; 14(7):e0008452
Doi: 10.1371/journal.pntd.0008452
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** Kittinger, C; Kirschner, A; Lipp, M; Baumert, R; Mascher, F; Farnleitner, AH; Zarfel, GE
Antibiotic Resistance of Acinetobacter spp. Isolates from the River Danube: Susceptibility Stays High
INT J ENV RES PUB HE. 2018; 15(1): 52
Doi: 10.3390/ijerph15010052
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** Zarfel, G; Lipp, M; Gürtl, E; Folli, B; Baumert, R; Kittinger, C
Troubled water under the bridge: Screening of River Mur water reveals dominance of CTX-M harboring Escherichia coli and for the first time an environmental VIM-1 producer in Austria.
Sci Total Environ. 2017; 593-594(6):399-405
Doi: 10.1016/j.scitotenv.2017.03.138
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** Kittinger, C; Lipp, M; Baumert, R; Folli, B; Koraimann, G; Toplitsch, D; Liebmann, A; Grisold, AJ; Farnleitner, AH; Kirschner, A; Zarfel, G
Antibiotic Resistance Patterns of Pseudomonas spp. Isolated from the River Danube.
Front Microbiol. 2016; 7(9):586-586
Doi: 10.3389/fmicb.2016.00586
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** Kittinger, C; Lipp, M; Folli, B; Kirschner, A; Baumert, R; Galler, H; Grisold, AJ; Luxner, J; Weissenbacher, M; Farnleitner, AH; Zarfel, G
Enterobacteriaceae Isolated from the River Danube: Antibiotic Resistances, with a Focus on the Presence of ESBL and Carbapenemases.
PLoS One. 2016; 11(11):e0165820
Doi: 10.1371/journal.pone.0165820
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** Kittinger, C; Baumert, R; Folli, B; Lipp, M; Liebmann, A; Kirschner, A; Farnleitner, AH; Grisold, AJ; Zarfel, GE
Preliminary Toxicological Evaluation of the River Danube Using in Vitro Bioassays
WATER-SUI. 2015; 7(5): 1959-1968.
Doi: 10.3390/w7051959
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