Medizinische Universität Graz Austria/Österreich - Forschungsportal - Medical University of Graz

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Diagnostik und Forschungsinstitut für Hygiene, Mikrobiologie und Umweltmedizin

SCI/PUBMED gelistet | alle Publikationstypen | Gesamt nach Jahr und Erstautor | MUG-Autor*innen |

** = Publikationen gelistet in SCI/SSCI/Pubmed

Originalarbeit (Zeitschrift)

** Bedenić, B; Luxner, J; Zarfel, G; Benčić, A; Sardelić, S; Anušić, M; Vraneš, J; Dobretzberger, V; Barišić, I; Grisold, A Characterization of Klebsiella pneumoniae Isolates Resistant to Cefiderocol from Hospitals and Outpatient Settings in Croatia.
Antibiotics (Basel). 2025; 14(2): Doi: 10.3390/antibiotics14020154 [OPEN ACCESS]
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** Bedenic, B; Luxner, J; Zarfel, G; Grisold, A; Dobric, M; Duras-Cuculic, B; Kasalo, M; Bratic, V; Dobretzberger, V; Barisic, I First Report of CTX-M-32 and CTX-M-101 in Proteus mirabilis from Zagreb, Croatia
ANTIBIOTICS-BASEL. 2025; 14(5): 462 Doi: 10.3390/antibiotics14050462 [OPEN ACCESS]
Web of Science PubMed PUBMED Central FullText FullText_MUG

 

** Diener, C; Holscher, HD; Filek, K; Corbin, KD; Moissl-Eichinger, C; Gibbons, SM Metagenomic estimation of dietary intake from human stool.
Nat Metab. 2025; Doi: 10.1038/s42255-025-01220-1 [OPEN ACCESS]
Web of Science PubMed PUBMED Central FullText FullText_MUG

 

** Galeone, V; Dabernig-Heinz, J; Lohde, M; Brandt, C; Kohler, C; Wagner, GE; Hölzer, M Decoding bacterial methylomes in four public health-relevant microbial species: nanopore sequencing enables reproducible analysis of DNA modifications.
BMC Genomics. 2025; 26(1):394 Doi: 10.1186/s12864-025-11592-z [OPEN ACCESS]
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** Grafakou, ME; Pferschy-Wenzig, EM; Aziz-Kalbhenn, H; Kelber, O; Moissl-Eichinger, C; Bauer, R Bidirectional interactions between St. John´s wort and gut microbiome: Potential implications on gut-brain-axis.
Biomed Pharmacother. 2025; 187:118111 Doi: 10.1016/j.biopha.2025.118111
PubMed FullText FullText_MUG

 

** Haas, D; Pikal, SR; Galler, H; Habib, J; Moser, T; Ofner-Kopeinig, P; Schalli, M Particulate matter and airborne microorganisms in a construction site in Graz, Austria
ATMOS ENVIRON. 2025; 344: 121025 Doi: 10.1016/j.atmosenv.2024.121025
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** Jiang, B; Quinn-Bohmann, N; Diener, C; Nathan, VB; Han-Hallett, Y; Reddivari, L; Gibbons, SM; Baloni, P Understanding disease-associated metabolic changes in human colonic epithelial cells using the iColonEpithelium metabolic reconstruction.
PLoS Comput Biol. 2025; 21(7):e1013253 Doi: 10.1371/journal.pcbi.1013253 [OPEN ACCESS]
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** Kakoschke, SC; Fleschutz, S; Ruff, E; Dichtl, K; Groeger, M; Schoen, C; Otto, S; Kakoschke, TK Pediatric Candida Manifestations in the Orofacial Region: A Retrospective Analysis of Different Forms, Risk Factors and Species Distribution
J FUNGI. 2025; 11(5): 363 Doi: 10.3390/jof11050363 [OPEN ACCESS]
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** Klugherz, I; Kölli, B; Reinmüller, M; Willinger, B; Leitner, E; Steinmetz, I; Dichtl, K Identification of Filamentous Fungi: An Evaluation of Three MALDI-TOF Mass Spectrometry Systems
MYCOSES. 2025; 68(6): e70078 Doi: 10.1111/myc.70078 [OPEN ACCESS]
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** Leopold, M; Kolm, C; Linke, RB; Schachner-Groehs, I; Koller, M; Kandler, W; Kittinger, C; Zarfel, G; Farnleitner, AH; Kirschner, AKT Using a harmonised study design and quantitative tool-box reveals major inconsistencies when investigating the main drivers of water and biofilm antibiotic resistomes in different rivers.
J Hazard Mater. 2025; 488:137343 Doi: 10.1016/j.jhazmat.2025.137343
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** Lichtenegger, S; Sonnleitner, ST; Saiger, S; Zauner, A; Hardt, M; Kleinhappl, B; Wagner, GE; Steinmetz, I Anti-RBD immunoglobulin levels and their predictive value for SARS-CoV-2 neutralization.
Microbiol Spectr. 2025; e0214824 Doi: 10.1128/spectrum.02148-24 [OPEN ACCESS]
Web of Science PubMed PUBMED Central FullText FullText_MUG

 

** Mohammadzadeh, R; Mahnert, A; Shinde, T; Kumpitsch, C; Weinberger, V; Schmidt, H; Moissl-Eichinger, C Age-related dynamics of predominant methanogenic archaea in the human gut microbiome.
BMC Microbiol. 2025; 25(1): 193 Doi: 10.1186/s12866-025-03921-9 [OPEN ACCESS]
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** Neumann, CJ; Mohammadzadeh, R; Woh, PY; Kobal, T; Pausan, M-R; Shinde, T; Haid, V; Mertelj, P; Weiss, E-C; Kolovetsiou-Kreiner, V; Mahnert, A; Kumpitsch, C; Jantscher-Krenn, E; Moissl-Eichinger, C First-year dynamics of the anaerobic microbiome and archaeome in infants' oral and gastrointestinal systems.
mSystems. 2025; 10(1):e0107124 Doi: 10.1128/msystems.01071-24 [OPEN ACCESS]
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** Poelzl, S; Dreisiebner, D; Zarschenas, E; Nokhbehzaeim, R; Kittinger, C A new method for testing non-porous surfaces for their antimicrobial efficacy using an aerosol-generating spray chamber.
Front Microbiol. 2024; 15:1508596 Doi: 10.3389/fmicb.2024.1508596 [OPEN ACCESS]
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** Prior, K; Becker, K; Brandt, C; Cabal, Rosel, A; Dabernig-Heinz, J; Kohler, C; Lohde, M; Ruppitsch, W; Schuler, F; Wagner, GE; Mellmann, A Accurate and reproducible whole-genome genotyping for bacterial genomic surveillance with Nanopore sequencing data.
J Clin Microbiol. 2025; e0036925 Doi: 10.1128/jcm.00369-25 [OPEN ACCESS]
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** Ruf, D; Striegler, K; Brazil, S; Elsaman, H; Singh, K; Lepas, M; Fernando, LD; Brantl, V; Heß, P; Dichtl, K; Aimanianda, V; Wang, T; Wagener, J Rho2 regulates granulocyte-triggered stress adaptation and cell wall remodeling in Aspergillus fumigatus.
Microbiol Res. 2025; 299: 128238 Doi: 10.1016/j.micres.2025.128238
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** Rüther, FD; Grisold, A; Wechsler-Fördös, A; Gropmann, A; Behnke, M; Hansen, S; Geffers, C; Aghdassi, SJS State of infection prevention and control in Austrian hospitals: data from 81 hospitals completing the WHO Infection Prevention and Control Assessment Framework (IPCAF)
ANTIMICROB RESIST IN. 2025; 14(1): 18 Doi: 10.1186/s13756-025-01532-7 [OPEN ACCESS]
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** Stelzl, E; Berger, A; Ciesek, S; Olivero, A; Lampertico, P; Callegaro, A; Renteria, SU; Heim, A; Aberle, SW; Springer, DN; Wedemeyer, H; Bremer, B; Sandmann, L; Reinhardt, A; Gey, B; Früchtel, C; Kessler, HH Accurate quantification using the new RoboGene HDV RNA Quantification Kit 3.0: A European multicenter study.
J Clin Virol. 2025; 179:105828 Doi: 10.1016/j.jcv.2025.105828
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** Tang, G; Carr, AV; Perez, C; Ramos, Sarmiento, K; Levy, L; Lampe, JW; Diener, C; Gibbons, SM Metagenomic estimation of absolute bacterial biomass in the mammalian gut through host-derived read normalization.
mSystems. 2025; e0098425 Doi: 10.1128/msystems.00984-25
PubMed FullText FullText_MUG

 

** Wagner, L; Wurst, M; Erber, J; Bachfischer, T; Haller, B; Gleich, S; Dichtl, K; Schmid, RM; Triebelhorn, J; Voit, F; Seybold, U; Busch, DH; Rämer, PC; Spinner, CD; Schneider, J; Rothe, K Risk factors for vancomycin resistance in patients with Enterococcus faecium bloodstream infections: an analysis of the Munich Multicentric Enterococci Cohort
MICROBIOL SPECTR. 2025; Doi: 10.1128/spectrum.00052-25 [OPEN ACCESS]
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** Weigl, S; Dabernig-Heinz, J; Granitz, F; Lipp, M; Ostermann, L; Harmsen, D; Trinh, TT; Steinmetz, I; Wagner, GE; Lichtenegger, S Improving Nanopore sequencing-based core genome MLST for global infection control: a strategy for GC-rich pathogens like Burkholderia pseudomallei.
J Clin Microbiol. 2025; e0156924 Doi: 10.1128/jcm.01569-24 [OPEN ACCESS]
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** Weinberger, V; Darnhofer, B; Thapa, HB; Mertelj, P; Stentz, R; Jones, E; Grabmann, G; Mohammadzadeh, R; Shinde, T; Karner, C; Ober, J; Juodeikis, R; Pernitsch, D; Hingerl, K; Zurabishvili, T; Kumpitsch, C; Kuehnast, T; Rinner, B; Strohmaier, H; Kolb, D; Gotts, K; Weichhart, T; Köcher, T; Köfeler, H; Carding, SR; Schild, S; Moissl-Eichinger, C Proteomic and metabolomic profiling of extracellular vesicles produced by human gut archaea
NAT COMMUN. 2025; 16(1): 5094 Doi: 10.1038/s41467-025-60271-w [OPEN ACCESS]
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** Weinberger, V; Mohammadzadeh, R; Blohs, M; Kalt, K; Mahnert, A; Moser, S; Cecovini, M; Mertelj, P; Zurabishvili, T; Arora, B; Wolf, J; Shinde, T; Madl, T; Habisch, H; Kolb, D; Pernitsch, D; Hingerl, K; Metcalf, W; Moissl-Eichinger, C Expanding the cultivable human archaeome: Methanobrevibacter intestini sp. nov. and strain Methanobrevibacter smithii 'GRAZ-2' from human faeces
INT J SYST EVOL MICR. 2025; 75(4): 006751 Doi: 10.1099/ijsem.0.006751 [OPEN ACCESS]
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** Woh, PY; Chen, Y; Kumpitsch, C; Mohammadzadeh, R; Schmidt, L; Moissl-Eichinger, C Reevaluation of the gastrointestinal methanogenic archaeome in multiple sclerosis and its association with treatment.
Microbiol Spectr. 2025; e0218324 Doi: 10.1128/spectrum.02183-24 [OPEN ACCESS]
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Übersichtsarbeit

** Buchta, C; Benka, B; Delatour, V; Faé, I; Griesmacher, A; Hellbert, K; Huggett, J; Kaiser, P; Kammel, M; Kessler, A; Kessler, HH; Müller, D; Rosendahl, J; Scheiblauer, H; Schweiger, CR; Zeichhardt, H; Cobbaert, CM Reference, calibration and referral laboratories - a look at current European provisions and beyond.
Clin Chem Lab Med. 2024; Doi: 10.1515/cclm-2024-1066
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** Quinn-Bohmann, N; Carr, AV; Diener, C; Gibbons, SM Moving from genome-scale to community-scale metabolic models for the human gut microbiome.
Nat Microbiol. 2025; Doi: 10.1038/s41564-025-01972-2
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** Santigli, E; Lindner, M; Kessler, HH; Jakse, N; Fakheran, O Seroprevalence of SARS-CoV-2 antibodies among oral health care workers with natural seroconversion: a systematic review and meta-analysis.
Sci Rep. 2025; 15(1): 7848 Doi: 10.1038/s41598-025-91529-4 [OPEN ACCESS]
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** Tome, MG; Gonzalez-Quevedo, R; dos Santos, ME; Dornbusch, HJ; Straus, S; Cooke, E Meningococcal B Vaccines as a Paradigm of Safe and Effective Vaccines for Children
VACCINES-BASEL. 2025; 13(7): 770 Doi: 10.3390/vaccines13070770 [OPEN ACCESS]
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Korrektur

** Diener, C; Holscher, HD; Filek, K; Corbin, KD; Moissl-Eichinger, C; Gibbons, SM Author Correction: Metagenomic estimation of dietary intake from human stool.
Nat Metab. 2025; 7(3):633 Doi: 10.1038/s42255-025-01284-z
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Pre-print

** Tang, G; Carr, AV; Perez, C; Sarmiento, KR; Levy, L; Lampe, JW; Diener, C; Gibbons, SM Metagenomic estimation of absolute bacterial biomass in the mammalian gut through host-derived read normalization.
bioRxiv. 2025; Doi: 10.1101/2025.01.07.631807 [OPEN ACCESS]
PubMed PUBMED Central FullText FullText_MUG

 

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