Dabernig-Heinz, J; Galeone, V; Hölzer, M; Lipp, M; Fuchs, S; Steinmetz, I; Kohler, C; Wagner GE;
Bioinformatic updates addressing methylation-related basecalling issues of long-read sequencing
data resolve typing issues in a multicentre performance study
ESCMID Global 2025; APR 11-15, 2025; Vienna, AUSTRIA. 2025.
[Poster]
Dabernig-Heinz, J; Lohde, M; Hölzer, M; Cabal, A; Brandt, C; Fuchs, S; Ruppitsch, W; Steinmetz, I; Kohler, C; Wagner GE
A multi-centre performance study on long-read bacterial genotyping revealed species- and isolate-dependent issues affecting accuracy and reproducibility
Genome Informatics; NOV 13-15, 2024; Cambridge, UK. 2024.
[Poster]
Dabernig-Heinz, J; Lohde, M; Hölzer, M; Cabal, A; Hyden, P;Stöger, A; Brandt, C; Fuchs, S; Ruppitsch, W; Steinmetz, I; Kohler, C; Wagner, GE
Comparability and reproducibility of bacterial genotyping is affected by species- and isolate-dependent issues in long read assemblies - a multi-centre performance study
34th European Congress of Clinical Microbiology and infectious diseases 2024; Apr 27-30, 2024; Barcelona, Spain. 2024.
[Poster]
Dabernig-Heinz, J; Steinmetz, I; Wagner, GE
Genotyping B. pertussis with long-read sequencing declined in accuracy in low
coverage assemblies of several strains after recent methodological updates
European Congress of clinical microbiology and infectious diseases - ESCMID global; APR 27-30, 2024; Barcelona, SPAIN. 2024.
[Poster]
Dabernig-Heinz, J; Wagner, GE, Kienesberger, S; Steinmetz, I; Leitner, E
Genotyping scheme for monophyletic Klebsiella oxytoca Species Complex
10th Theodor Escherich Symposium; JAN 18-19, 2024; Medizinische Universität Graz, Graz, Austria. 2024.
[Poster]
FullText
Dabernig-Heinz, J; Wagner, GE; Kienesberger, S; Steinmetz, I; Leitner, E;
Genomic surveillance of monophyletic Klebsiella oxytoca species complex by core genome MLST
16th ÖGMBT Annual Meeting; SEP 16-19, 2024; Graz, AUSTRIA. 2024.
[Poster]
Sonnleitner, Sissy Therese; Wagner-Lichtenegger, Sabine; Wagner-Lichtenegger, Gabriel; Assig, Karoline; Dabernig-Heinz, Johanna; Lipp, Michaela; Kleinhappl, Barbara; Trung, Trinh Thanh; Steinmetz, Ivo.
Standardizing Direct Molecular Detection
of Burkholderia pseudomallei in Soil:
Refining the Workflow for qPCR-Based Environmental Analysis
https://www.wmc2024.org.au/abstracts. 2024; -World Melioidosis Congress 2024; OCT 21-23, 2024; Darwin, AUS.
[Oral Communication]
Sonnleitner, ST; Wagner-Lichtenegger, S; Wagner-Lichtenegger, G; Assig, K; Dabernig-Heinz, J; Lipp, M; Kleinhappl, B; Trung, TT; Steinmetz, I
Refining direct molecular detection of Burkholderia pseudomallei in soil: A standardized workflow for qPCR-based environmental studies.
https://www.wmc2024.org.au/. 2024; -10TH WORLD MELIOIDOSIS CONGRESS; OCT 21-23, 2024; Darwin, AUS.
[Oral Communication]
Weigl, S; Dabernig-Heinz, J; Granitz, F; Lipp, M; Kohler , C; Trinh, TT.; Ostermann, L; Wagner, GE.; Steinmetz, I; Lichtenegger, S
Nanopore sequencing-based core genome multilocus sequence typing for
B. pseudomallei surveillance and global infection control.
World Melioidosis Conference; OCT 21-23, 2024; Darwin, Australia. 2024.
[Oral Communication]
Dabernig-Heinz, J; Wagner, GE; Steinmetz, I
Real-time Nanopore sequencing of Bordetella pertussis and core genome MLST typing.
29th Doc Day - Dissertant*innenseminar (Wissenschaftliches Kolloquium II); JUL 5, 2023; Universität Graz, Graz, Austria. 2023.
[Poster]